天麻简单重复序列反应体系的初步研究A Preliminary Study on the Simple Sequence Repeat Reaction System of Gastrodia elata
宋聚先,邹佳宁,王晓丽
SONG Ju-xian~1, ZOU Jia-ning~1, WANG Xiao-li~2 (1.Lab for Molecular Pharmacognosy
摘要(Abstract):
目的:探讨兰科药用植物天麻(GastrodiaelataBl.)简单重复序列(simplesequencerepeat,SSR)PCR循环中退火温度及反应体系中各主要成分对反应的影响。方法:根据Genebank登录的天麻微卫星序列设计引物,并对反应体系中各影响因素进行优化。结果:所设计引物可扩增出预期的条带,并构建了清晰稳定的SSR指纹图谱,最终建立的25μl反应体系为:TaqDNA酶1U、Mg2+1·2~1·6mmol/L、引物各0·4~0·6μmol/L、模板DNA40~60mg/L和dNTPs0·20mmol/L。结论:首次初步确立了适合天麻SSR的最佳退火温度及反应体系中各主要成分的最佳浓度,为天麻的SSR分子标记及遗传多态性分析奠定了一定基础。
Objective: To observe the effects of annealing temperature of cycling condition and concentration of each element on simple sequence repeat (SSR) reaction system employed for studys of medical plant Gastrodia elata Bl. Methods: Primers were designed according to microsatellite loci of G. elata Bl. recorded in GENEBANK and concentrations of all ingredients of the reaction were optimized. Results: Clear and repeatable SSR fingerprinting is constructed using self-designed primers. The optimized reaction system was: Taq DNA polymarase 1U, Mg~ 2+ 1.2-1.6 mmol.L~ -1 , each primer 0.4-0.6μmol.L~ -1 , template DNA 40-60ng/ul, dNTPs 0.20 mmol.L~ -1 . Conclusions: Optimized annealing temperature and ingredients of SSR reaction system were constructed for the first time which can be used in the molecular fingerprinting and genetic polymorphism analysis.
关键词(KeyWords):
天麻;序列分析,DNA;串联重复序列
gastrodia, elata;sequence analysis,DNA;tandem repeat sequences
基金项目(Foundation): 科技部2004BA721A33项目;; 贵州省科技黔科合农社字(2001)1125号项目;; 黔科合中药专字[2003]51号项目
作者(Author):
宋聚先,邹佳宁,王晓丽
SONG Ju-xian~1, ZOU Jia-ning~1, WANG Xiao-li~2 (1.Lab for Molecular Pharmacognosy
DOI: 10.19367/j.cnki.1000-2707.2006.06.006
参考文献(References):
- [1]陈佩度.作物育种生物技术[M].北京:中国农业出版社,2001:134-138.
- [2]邹喻苹,葛颂,王晓东.系统与进化植物学中的分子标记[M].北京:科学出版社,2001:68-107.
- [3]高志红,章镇,韩振海.SSR技术及其在果树上的应用[J].果树学报,2002,19(5):281-285.
- [4]席章营,张桂权.SSR标记及其在作物遗传育种中的应用[J].河南农业大学学报,2002,36(3):293-297.
- [5]王长有,吉万全,王秋英,等.SSR标记在小麦遗传育种中的应用研究进展[M].麦类作物学报,2004,24(1):70-74.
- [6]Murray M G,Thompson W F.Rapid isolation of high mo-lecular weight plant DNA[J].Nucleic Acids Research,1980,8(19):4321-4325.
- [7]乔玉山,章镇,沈志军,等.中国李简单重复序列(SSR)反应体系的建立[J].植物生理学通讯,2004,40(1):83-86.
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